Acosta P, Panwar V, Jarmale J, Christie A, Jasti J, Margulis V, Rakheja D, Cheville J, Leibovich BC, Parker A, Brugarolas J, Kapur P, Rajaram S Cancer Research 2022 June
Deep learning reveals disease-specific signatures of white matter pathology in tauopathies.
Vega AR, Chkheidze R, Jarmale J, Shang P, Foong, Diamond MI, White III CL, Rajaram S Acta Neuro Comm 2021 Oct
Sampling strategies to capture single-cell heterogeneity.
Rajaram S, Heinrich LE, Gordan JD, Avva J, Bonness KM, Witkiewicz AK, Malter JS, Atreya CE, Warren RS, Wu LF, Altschuler SJ Nat. Methods 2017 Sep
PhenoRipper: software for rapidly profiling microscopy images.
Rajaram S, Pavie B, Wu LF, Altschuler SJ Nat. Methods 2012 Jun 9 7 635-7
Deb D, Rajaram S, Larsen JE, Dospoy PD, Marullo R, Li LS, Avila K, Xue F, Cerchietti L, Minna JD, Altschuler SJ, Wu LF Cancer Res. 2017 Jun 77 11 3070-3081
Diverse drug-resistance mechanisms can emerge from drug-tolerant cancer persister cells.
Ramirez M, Rajaram S, Steininger RJ, Osipchuk D, Roth MA, Morinishi LS, Evans L, Ji W, Hsu CH, Thurley K, Wei S, Zhou A, Koduru PR, Posner BA, Wu LF, Altschuler SJ Nat Commun 2016 Feb 7 10690
On comparing heterogeneity across biomarkers.
Steininger RJ, Rajaram S, Girard L, Minna JD, Wu LF, Altschuler SJ Cytometry A 2015 Jun 87 6 558-67
A simple image correction method for high-throughput microscopy.
Coster AD, Wichaidit C, Rajaram S, Altschuler SJ, Wu LF Nat. Methods 2014 Jun 11 6 602
Rapid analysis and exploration of fluorescence microscopy images.
Pavie B, Rajaram S, Ouyang A, Altschuler JM, Steininger RJ, Wu LF, Altschuler SJ J Vis Exp 2014 Mar 85
SimuCell: a flexible framework for creating synthetic microscopy images.
Rajaram S, Pavie B, Hac NE, Altschuler SJ, Wu LF Nat. Methods 2012 Jun 9 7 634-5
NeatMap--non-clustering heat map alternatives in R.
Rajaram S, Oono Y BMC Bioinformatics 2010 Jan 11 45
A novel meta-analysis method exploiting consistency of high-throughput experiments.
Rajaram S Bioinformatics 2009 Mar 25 5 636-42